GreeNC

Gene information

This table contains information about coordinates, assembly and annotation regarding the lncRNA-transcribing gene. In details, it shows whether this this gene transcribes any protein-coding transcript.

Gene alias / name	Chrom.	Start	End	Source	Assembly	Species	Details
Fvesca_gene14804-v1.0-hybrid gene14804-v1.0-hybrid	LG2	23689384	23690034	Phytozome	v1.1	Fragaria_vesca	Coding? No

Transcript features

This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.

Transcript alias / name	Confidence	Pre-miRNA	Length	Sequence	Details
Fvesca_mrna14804.1-v1.0-hybrid mrna14804.1-v1.0-hybrid PAC:27264674	High	No	261		Get ORF Coding potential... Type: noncoding Potential: -0.699 Folding energies... MFEI: -34.598 AMFE: -0.640 GC content %: 54.023

Gene models

Transcripts can be colored as magenta (coding transcripts), green (high confidence lncRNAs), cyan (low confidence lncRNAs), or salmon (other ncRNAs).