Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Gmax_Glyma.08G281800 Glyma.08G281800 |
Chr08 | 38601473 | 38602888 | Phytozome | Wm82.a2.v1 | Glycine_max | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Gmax_Glyma.08G281800.1 Glyma.08G281800.1 PAC:30539311 |
High | No | 1086 | Get ORF Coding potential... Type: noncoding Potential: -0.680 Folding energies... MFEI: -24.705 AMFE: -0.643 GC content %: 38.398 | |
Gmax_Glyma.08G281800.2 Glyma.08G281800.2 PAC:30539310 |
High | No | 1081 | Get ORF Coding potential... Type: noncoding Potential: -0.679 Folding energies... MFEI: -24.940 AMFE: -0.651 GC content %: 38.298 | |
Gmax_Glyma.08G281800.3 Glyma.08G281800.3 PAC:30539312 |
High | No | 948 | Get ORF Coding potential... Type: noncoding Potential: -0.647 Folding energies... MFEI: -24.842 AMFE: -0.651 GC content %: 38.186 | |
Gmax_Glyma.08G281800.4 Glyma.08G281800.4 PAC:30539309 |
High | No | 524 | Get ORF Coding potential... Type: noncoding Potential: -0.482 Folding energies... MFEI: -27.328 AMFE: -0.628 GC content %: 43.511 | |
Gmax_Glyma.08G281800.5 Glyma.08G281800.5 PAC:30539313 |
High | No | 472 | Get ORF Coding potential... Type: noncoding Potential: -0.453 Folding energies... MFEI: -28.602 AMFE: -0.640 GC content %: 44.703 |