Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Gmax_Glyma.10G213300 Glyma.10G213300 |
Chr10 | 44572341 | 44576098 | Phytozome | Wm82.a2.v1 | Glycine_max | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Gmax_Glyma.10G213300.1 Glyma.10G213300.1 PAC:30477039 |
High | No | 804 | Get ORF Coding potential... Type: noncoding Potential: -0.992 Folding energies... MFEI: -25.323 AMFE: -0.665 GC content %: 38.060 | |
Gmax_Glyma.10G213300.2 Glyma.10G213300.2 PAC:30477041 |
High | No | 1221 | Get ORF Coding potential... Type: noncoding Potential: -1.041 Folding energies... MFEI: -26.527 AMFE: -0.701 GC content %: 37.838 | |
Gmax_Glyma.10G213300.3 Glyma.10G213300.3 PAC:30477040 |
High | No | 1307 | Get ORF Coding potential... Type: noncoding Potential: -1.054 Folding energies... MFEI: -26.236 AMFE: -0.698 GC content %: 37.567 | |
Gmax_Glyma.10G213300.4 Glyma.10G213300.4 PAC:30477044 |
High | No | 1453 | Get ORF Coding potential... Type: noncoding Potential: -1.073 Folding energies... MFEI: -25.520 AMFE: -0.694 GC content %: 36.752 | |
Gmax_Glyma.10G213300.5 Glyma.10G213300.5 PAC:30477042 |
High | No | 799 | Get ORF Coding potential... Type: noncoding Potential: -0.945 Folding energies... MFEI: -24.556 AMFE: -0.648 GC content %: 37.922 | |
Gmax_Glyma.10G213300.6 Glyma.10G213300.6 PAC:30477043 |
High | No | 888 | Get ORF Coding potential... Type: noncoding Potential: -0.971 Folding energies... MFEI: -24.324 AMFE: -0.653 GC content %: 37.275 |