Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Graimondii_Gorai.001G006300 Gorai.001G006300 |
Chr01 | 562805 | 564763 | Phytozome | v2.1 | Gossypium_raimondii | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Graimondii_Gorai.001G006300.1 Gorai.001G006300.1 PAC:26824494 |
High | No | 817 | Get ORF Coding potential... Type: noncoding Potential: -1.084 Folding energies... MFEI: -21.836 AMFE: -0.568 GC content %: 38.433 | |
Graimondii_Gorai.001G006300.2 Gorai.001G006300.2 PAC:26824495 |
High | No | 1048 | Get ORF Coding potential... Type: noncoding Potential: -1.104 Folding energies... MFEI: -21.555 AMFE: -0.569 GC content %: 37.882 |