Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Graimondii_Gorai.002G092300 Gorai.002G092300 |
Chr02 | 11722239 | 11723686 | Phytozome | v2.1 | Gossypium_raimondii | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Graimondii_Gorai.002G092300.1 Gorai.002G092300.1 PAC:26792563 |
High | No | 594 | Get ORF Coding potential... Type: noncoding Potential: -0.887 Folding energies... MFEI: -22.626 AMFE: -0.560 GC content %: 40.404 | |
Graimondii_Gorai.002G092300.2 Gorai.002G092300.2 PAC:26792564 |
High | No | 680 | Get ORF Coding potential... Type: noncoding Potential: -0.913 Folding energies... MFEI: -24.706 AMFE: -0.606 GC content %: 40.735 |