Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Graimondii_Gorai.004G012300 Gorai.004G012300 |
Chr04 | 883061 | 884940 | Phytozome | v2.1 | Gossypium_raimondii | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Graimondii_Gorai.004G012300.1 Gorai.004G012300.1 PAC:26772065 |
High | No | 375 | Get ORF Coding potential... Type: noncoding Potential: -0.604 Folding energies... MFEI: -20.107 AMFE: -0.580 GC content %: 34.667 | |
Graimondii_Gorai.004G012300.2 Gorai.004G012300.2 PAC:26772066 |
High | No | 532 | Get ORF Coding potential... Type: noncoding Potential: -0.891 Folding energies... MFEI: -18.910 AMFE: -0.553 GC content %: 34.211 |