Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Graimondii_Gorai.004G013000 Gorai.004G013000 |
Chr04 | 954347 | 955356 | Phytozome | v2.1 | Gossypium_raimondii | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Graimondii_Gorai.004G013000.1 Gorai.004G013000.1 PAC:26771771 |
High | No | 867 | Get ORF Coding potential... Type: noncoding Potential: -0.989 Folding energies... MFEI: -23.725 AMFE: -0.740 GC content %: 32.065 | |
Graimondii_Gorai.004G013000.2 Gorai.004G013000.2 PAC:26771772 |
High | No | 864 | Get ORF Coding potential... Type: noncoding Potential: -0.956 Folding energies... MFEI: -23.611 AMFE: -0.736 GC content %: 32.060 |