Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Graimondii_Gorai.010G002800 Gorai.010G002800 |
Chr10 | 114345 | 116352 | Phytozome | v2.1 | Gossypium_raimondii | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Graimondii_Gorai.010G002800.1 Gorai.010G002800.1 PAC:26759130 |
Low | No | 999 | Get ORF Coding potential... Type: noncoding Potential: -0.333 Folding energies... MFEI: -23.774 AMFE: -0.615 GC content %: 38.639 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Graimondii_Gorai.010G002800.1 | SwissProt | 2015-06-01 | O94703 | 3.0e-12 |