Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Graimondii_Gorai.012G028300 Gorai.012G028300 |
Chr12 | 3484098 | 3488384 | Phytozome | v2.1 | Gossypium_raimondii | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Graimondii_Gorai.012G028300.1 Gorai.012G028300.1 PAC:26827182 |
High | No | 1774 | Get ORF Coding potential... Type: noncoding Potential: -0.623 Folding energies... MFEI: -24.769 AMFE: -0.663 GC content %: 37.373 | |
Graimondii_Gorai.012G028300.2 Gorai.012G028300.2 PAC:26827181 |
High | No | 1597 | Get ORF Coding potential... Type: noncoding Potential: -0.606 Folding energies... MFEI: -24.640 AMFE: -0.654 GC content %: 37.696 | |
Graimondii_Gorai.012G028300.3 Gorai.012G028300.3 PAC:26827183 |
High | No | 1601 | Get ORF Coding potential... Type: noncoding Potential: -0.606 Folding energies... MFEI: -24.803 AMFE: -0.657 GC content %: 37.726 |