Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Graimondii_Gorai.013G074000 Gorai.013G074000 |
Chr13 | 8924219 | 8926723 | Phytozome | v2.1 | Gossypium_raimondii | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Graimondii_Gorai.013G074000.1 Gorai.013G074000.1 PAC:26789749 |
High | No | 544 | Get ORF Coding potential... Type: noncoding Potential: -0.698 Folding energies... MFEI: -26.103 AMFE: -0.592 GC content %: 44.118 | |
Graimondii_Gorai.013G074000.2 Gorai.013G074000.2 PAC:26789751 |
High | No | 1070 | Get ORF Coding potential... Type: noncoding Potential: -0.917 Folding energies... MFEI: -22.393 AMFE: -0.562 GC content %: 39.813 | |
Graimondii_Gorai.013G074000.3 Gorai.013G074000.3 PAC:26789750 |
High | No | 734 | Get ORF Coding potential... Type: noncoding Potential: -0.783 Folding energies... MFEI: -25.191 AMFE: -0.581 GC content %: 43.324 |