Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Klaxiflora_Kalax.0060s0030 Kalax.0060s0030 |
scaffold_60 | 295573 | 297030 | Phytozome | [[Species:|]]"Species:" cannot be used as a page name in this wiki. | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Klaxiflora_Kalax.0060s0030.1 Kalax.0060s0030.1 PAC:32576053 |
Low | No | 1351 | Get ORF Coding potential... Type: coding Potential: 0.093 Folding energies... MFEI: -29.443 AMFE: -0.678 GC content %: 43.449 | |
Klaxiflora_Kalax.0060s0030.2 Kalax.0060s0030.2 PAC:32576054 |
Low | No | 1196 | Get ORF Coding potential... Type: coding Potential: 0.114 Folding energies... MFEI: -29.931 AMFE: -0.670 GC content %: 44.649 |