Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Klaxiflora_Kalax.0492s0001 Kalax.0492s0001 |
scaffold_492 | 20 | 1599 | Phytozome | [[Species:|]]"Species:" cannot be used as a page name in this wiki. | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Klaxiflora_Kalax.0492s0001.1 Kalax.0492s0001.1 PAC:32535256 |
High | No | 552 | Get ORF Coding potential... Type: noncoding Potential: -1.073 Folding energies... MFEI: -28.659 AMFE: -0.602 GC content %: 47.645 | |
Klaxiflora_Kalax.0492s0001.2 Kalax.0492s0001.2 PAC:32535257 |
High | No | 383 | Get ORF Coding potential... Type: noncoding Potential: -0.970 Folding energies... MFEI: -29.112 AMFE: -0.609 GC content %: 47.781 |