Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Lusitatissimum_Lus10000984.g Lus10000984.g |
scaffold1671 | 3009 | 3344 | Phytozome | v1.0 | Linum_usitatissimum | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Lusitatissimum_Lus10000984 Lus10000984 PAC:23162249 |
Low | No | 213 | Get ORF Coding potential... Type: noncoding Potential: -0.556 Folding energies... MFEI: -26.479 AMFE: -0.537 GC content %: 49.296 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Lusitatissimum_Lus10000984 | SwissProt | 2015-06-01 | B9SBV6 | 1.0e-5 |