Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Lusitatissimum_Lus10014574.g Lus10014574.g |
scaffold107 | 358148 | 358773 | Phytozome | v1.0 | Linum_usitatissimum | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Lusitatissimum_Lus10014574 Lus10014574 PAC:23170901 |
Low | No | 207 | Get ORF Coding potential... Type: noncoding Potential: -0.254 Folding energies... MFEI: -24.734 AMFE: -0.522 GC content %: 47.343 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Lusitatissimum_Lus10014574 | SwissProt | 2015-06-01 | Q8GYN5 | 6.0e-7 |