Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Lusitatissimum_Lus10026975.g Lus10026975.g |
scaffold651 | 888744 | 889145 | Phytozome | v1.0 | Linum_usitatissimum | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Lusitatissimum_Lus10026975 Lus10026975 PAC:23142934 |
Low | No | 243 | Get ORF Coding potential... Type: noncoding Potential: -0.675 Folding energies... MFEI: -24.321 AMFE: -0.574 GC content %: 42.387 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Lusitatissimum_Lus10026975 | SwissProt | 2015-06-01 | B6EGX8 | 4.0e-11 |