Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Lusitatissimum_Lus10027690.g Lus10027690.g |
scaffold2 | 858050 | 858337 | Phytozome | v1.0 | Linum_usitatissimum | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Lusitatissimum_Lus10027690 Lus10027690 PAC:23151275 |
Low | No | 288 | Get ORF Coding potential... Type: noncoding Potential: -0.807 Folding energies... MFEI: -35.764 AMFE: -0.678 GC content %: 52.778 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Lusitatissimum_Lus10027690 | SwissProt | 2015-06-01 | P33083 | 6.0e-7 |