Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Lusitatissimum_Lus10032401.g Lus10032401.g |
scaffold291 | 1132392 | 1132637 | Phytozome | v1.0 | Linum_usitatissimum | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Lusitatissimum_Lus10032401 Lus10032401 PAC:23168575 |
Low | No | 246 | Get ORF Coding potential... Type: noncoding Potential: -0.564 Folding energies... MFEI: -27.846 AMFE: -0.591 GC content %: 47.154 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Lusitatissimum_Lus10032401 | RepBase (RepeatMasker) | 2014-01-31 | EnSpm-34_SBi | |
Lusitatissimum_Lus10032401 | SwissProt | 2015-06-01 | P51566 | 3.0e-7 |