Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Macuminata_GSMUA_Achr10G08460_001 GSMUA_Achr10G08460_001 |
chr10 | 18437914 | 18438525 | Phytozome | v1 | Musa_acuminata | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Macuminata_GSMUA_Achr10T08460_001 GSMUA_Achr10T08460_001 PAC:32321846 |
Low | No | 360 | Get ORF Coding potential... Type: noncoding Potential: -0.162 Folding energies... MFEI: -44.056 AMFE: -0.687 GC content %: 64.167 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Macuminata_GSMUA_Achr10T08460_001 | SwissProt | 2015-06-01 | Q9SUI5 | 5.0e-29 |