Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Macuminata_GSMUA_Achr10G08620_001 GSMUA_Achr10G08620_001 |
chr10 | 18532820 | 18536062 | Phytozome | v1 | Musa_acuminata | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Macuminata_GSMUA_Achr10T08620_001 GSMUA_Achr10T08620_001 PAC:32323399 |
Low | No | 677 | Get ORF Coding potential... Type: noncoding Potential: -0.498 Folding energies... MFEI: -31.979 AMFE: -0.658 GC content %: 48.597 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Macuminata_GSMUA_Achr10T08620_001 | SwissProt | 2015-06-01 | Q75WU1 | 1.0e-18 |