Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Macuminata_GSMUA_Achr11G15300_001 GSMUA_Achr11G15300_001 |
chr11 | 16849487 | 16851083 | Phytozome | v1 | Musa_acuminata | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Macuminata_GSMUA_Achr11T15300_001 GSMUA_Achr11T15300_001 PAC:32315859 |
Low | No | 635 | Get ORF Coding potential... Type: noncoding Potential: -0.137 Folding energies... MFEI: -22.646 AMFE: -0.553 GC content %: 40.945 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Macuminata_GSMUA_Achr11T15300_001 | SwissProt | 2015-06-01 | Q94AH3 | 1.0e-30 |