Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Macuminata_GSMUA_Achr3G23000_001 GSMUA_Achr3G23000_001 |
chr3 | 23803123 | 23803443 | Phytozome | v1 | Musa_acuminata | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Macuminata_GSMUA_Achr3T23000_001 GSMUA_Achr3T23000_001 PAC:32294182 |
Low | No | 321 | Get ORF Coding potential... Type: noncoding Potential: -0.657 Folding energies... MFEI: -45.483 AMFE: -0.667 GC content %: 68.224 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Macuminata_GSMUA_Achr3T23000_001 | SwissProt | 2015-06-01 | Q9ZPX9 | 1.0e-19 |