Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Macuminata_GSMUA_Achr5G06580_001 GSMUA_Achr5G06580_001 |
chr5 | 4837337 | 4838063 | Phytozome | v1 | Musa_acuminata | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Macuminata_GSMUA_Achr5T06580_001 GSMUA_Achr5T06580_001 PAC:32326858 |
Low | No | 454 | Get ORF Coding potential... Type: noncoding Potential: -0.577 Folding energies... MFEI: -21.498 AMFE: -0.555 GC content %: 38.767 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Macuminata_GSMUA_Achr5T06580_001 | SwissProt | 2015-06-01 | Q40704 | 3.0e-22 |