Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Macuminata_GSMUA_Achr6G17940_001 GSMUA_Achr6G17940_001 |
chr6 | 12095159 | 12095593 | Phytozome | v1 | Musa_acuminata | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Macuminata_GSMUA_Achr6T17940_001 GSMUA_Achr6T17940_001 PAC:32321296 |
Low | No | 294 | Get ORF Coding potential... Type: noncoding Potential: -0.679 Folding energies... MFEI: -24.864 AMFE: -0.653 GC content %: 38.095 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Macuminata_GSMUA_Achr6T17940_001 | SwissProt | 2015-06-01 | Q9XI00 | 6.0e-15 |