Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Macuminata_GSMUA_Achr9G13530_001 GSMUA_Achr9G13530_001 |
chr9 | 8800754 | 8804216 | Phytozome | v1 | Musa_acuminata | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Macuminata_GSMUA_Achr9T13530_001 GSMUA_Achr9T13530_001 PAC:32307783 |
Low | No | 864 | Get ORF Coding potential... Type: noncoding Potential: -0.236 Folding energies... MFEI: -31.701 AMFE: -0.675 GC content %: 46.991 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Macuminata_GSMUA_Achr9T13530_001 | SwissProt | 2015-06-01 | P38385 | 5.0e-27 |