Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Macuminata_GSMUA_AchrUn_randomG20450_001 GSMUA_AchrUn_randomG20450_001 |
chrUn_random | 99204558 | 99205708 | Phytozome | v1 | Musa_acuminata | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Macuminata_GSMUA_AchrUn_randomT20450_001 GSMUA_AchrUn_randomT20450_001 PAC:32295312 |
Low | No | 405 | Get ORF Coding potential... Type: noncoding Potential: -0.154 Folding energies... MFEI: -23.432 AMFE: -0.572 GC content %: 40.988 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Macuminata_GSMUA_AchrUn_randomT20450_001 | SwissProt | 2015-06-01 | B1B1U4 | 1.0e-31 |