Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Macuminata_GSMUA_AchrUn_randomG23650_001 GSMUA_AchrUn_randomG23650_001 |
chrUn_random | 115809581 | 115810136 | Phytozome | v1 | Musa_acuminata | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Macuminata_GSMUA_AchrUn_randomT23650_001 GSMUA_AchrUn_randomT23650_001 PAC:32296779 |
Low | No | 465 | Get ORF Coding potential... Type: noncoding Potential: -0.668 Folding energies... MFEI: -28.559 AMFE: -0.580 GC content %: 49.247 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Macuminata_GSMUA_AchrUn_randomT23650_001 | SwissProt | 2015-06-01 | P14009 | 6.0e-15 |