Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Mdomestica_MDP0000145554 MDP0000145554 |
MDC018770.182 | 2 | 289 | Phytozome | v1.0 | Malus_domestica | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Mdomestica_MDP0000145554 MDP0000145554 PAC:22653607 |
Low | No | 288 | Get ORF Coding potential... Type: coding Potential: 0.221 Folding energies... MFEI: -15.000 AMFE: -0.260 GC content %: 57.639 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Mdomestica_MDP0000145554 | RepBase (RepeatMasker) | 2014-01-31 | (TGG)n |