Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Mdomestica_MDP0000158656 MDP0000158656 |
MDC000122.158 | 7976 | 8500 | Phytozome | v1.0 | Malus_domestica | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Mdomestica_MDP0000158656 MDP0000158656 PAC:22639744 |
Low | No | 330 | Get ORF Coding potential... Type: noncoding Potential: -0.457 Folding energies... MFEI: -20.273 AMFE: -0.461 GC content %: 43.939 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Mdomestica_MDP0000158656 | RepBase (RepeatMasker) | 2014-01-31 | HARB-5_Mad |