Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Mdomestica_MDP0000325781 MDP0000325781 |
MDC003936.406 | 12903 | 13163 | Phytozome | v1.0 | Malus_domestica | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Mdomestica_MDP0000325781 MDP0000325781 PAC:22682593 |
Low | No | 261 | Get ORF Coding potential... Type: noncoding Potential: -1.239 Folding energies... MFEI: -21.456 AMFE: -0.352 GC content %: 60.920 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Mdomestica_MDP0000325781 | RepBase (RepeatMasker) | 2014-01-31 | Gypsy-39_Mad-LTR |