Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Mdomestica_MDP0000831191 MDP0000831191 |
MDC004531.401 | 4558 | 4896 | Phytozome | v1.0 | Malus_domestica | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Mdomestica_MDP0000831191 MDP0000831191 PAC:22663588 |
Low | No | 339 | Get ORF Coding potential... Type: coding Potential: 0.153 Folding energies... MFEI: -18.673 AMFE: -0.532 GC content %: 35.103 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Mdomestica_MDP0000831191 | RepBase (RepeatMasker) | 2014-01-31 | Copia-105_Mad-I |