Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Mdomestica_MDP0000839765 MDP0000839765 |
MDC003651.464 | 1852 | 2190 | Phytozome | v1.0 | Malus_domestica | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Mdomestica_MDP0000839765 MDP0000839765 PAC:22671172 |
Low | No | 339 | Get ORF Coding potential... Type: noncoding Potential: -0.485 Folding energies... MFEI: -30.118 AMFE: -0.580 GC content %: 51.917 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Mdomestica_MDP0000839765 | RepBase (RepeatMasker) | 2014-01-31 | Gypsy-19_Mad-I |