Gene

Mesculenta Manes.05G010200

From GreeNC


Gene information
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This table contains information about coordinates, assembly and annotation regarding the lncRNA-transcribing gene. In details, it shows whether this this gene transcribes any protein-coding transcript.

Gene alias / name Chrom. Start End Source Assembly Species Details

Mesculenta_Manes.05G010200
Manes.05G010200
Chromosome05 672084 672457 Phytozome v6.1 Manihot_esculenta
Coding?
No


Transcript features
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This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.

Transcript alias / name Confidence Pre-miRNA Length Sequence Details

Mesculenta_Manes.05G010200.1
Manes.05G010200.1
PAC:32337234
High No 374
Coding potential...
Type: noncoding Potential: -0.922
Folding energies...
MFEI: -26.070 AMFE: -0.598
GC content
%: 43.583


Gene models
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Transcripts can be colored as magenta (coding transcripts), green (high confidence lncRNAs), cyan (low confidence lncRNAs), or salmon (other ncRNAs).

Manes.05G010200.png