Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Mesculenta_Manes.05G127500 Manes.05G127500 |
Chromosome05 | 15297065 | 15298276 | Phytozome | v6.1 | Manihot_esculenta | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Mesculenta_Manes.05G127500.1 Manes.05G127500.1 PAC:32337103 |
High | No | 705 | Get ORF Coding potential... Type: noncoding Potential: -0.678 Folding energies... MFEI: -24.014 AMFE: -0.656 GC content %: 36.596 | |
Mesculenta_Manes.05G127500.2 Manes.05G127500.2 PAC:32337104 |
High | No | 779 | Get ORF Coding potential... Type: noncoding Potential: -0.638 Folding energies... MFEI: -22.863 AMFE: -0.623 GC content %: 36.714 |