Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Mesculenta_Manes.08G057500 Manes.08G057500 |
Chromosome08 | 6100518 | 6104472 | Phytozome | v6.1 | Manihot_esculenta | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Mesculenta_Manes.08G057500.1 Manes.08G057500.1 PAC:32330635 |
High | No | 819 | Get ORF Coding potential... Type: noncoding Potential: -1.087 Folding energies... MFEI: -23.590 AMFE: -0.644 GC content %: 36.630 | |
Mesculenta_Manes.08G057500.2 Manes.08G057500.2 PAC:32330636 |
High | No | 761 | Get ORF Coding potential... Type: noncoding Potential: -0.955 Folding energies... MFEI: -23.587 AMFE: -0.641 GC content %: 36.794 |