Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Mguttatus_Migut.B01462 Migut.B01462 |
scaffold_2 | 16540801 | 16542869 | Phytozome | v2.0 | Mimulus_guttatus | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Mguttatus_Migut.B01462.1 Migut.B01462.1 PAC:28946360 |
High | No | 737 | Get ORF Coding potential... Type: noncoding Potential: -0.848 Folding energies... MFEI: -23.582 AMFE: -0.603 GC content %: 39.077 | |
Mguttatus_Migut.B01462.2 Migut.B01462.2 PAC:28946361 |
High | No | 661 | Get ORF Coding potential... Type: noncoding Potential: -0.814 Folding energies... MFEI: -22.269 AMFE: -0.582 GC content %: 38.275 | |
Mguttatus_Migut.B01462.3 Migut.B01462.3 PAC:28946362 |
High | No | 741 | Get ORF Coding potential... Type: noncoding Potential: -0.843 Folding energies... MFEI: -23.563 AMFE: -0.600 GC content %: 39.271 |