Gene

Mguttatus Migut.F01382

From GreeNC


Gene information
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This table contains information about coordinates, assembly and annotation regarding the lncRNA-transcribing gene. In details, it shows whether this this gene transcribes any protein-coding transcript.

Gene alias / name Chrom. Start End Source Assembly Species Details

Mguttatus_Migut.F01382
Migut.F01382
scaffold_6 8810561 8812106 Phytozome v2.0 Mimulus_guttatus
Coding?
No


Transcript features
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This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.

Transcript alias / name Confidence Pre-miRNA Length Sequence Details

Mguttatus_Migut.F01382.1
Migut.F01382.1
PAC:28932016
High No 924
Coding potential...
Type: noncoding Potential: -1.051
Folding energies...
MFEI: -21.710 AMFE: -0.627
GC content
%: 34.632
Mguttatus_Migut.F01382.2
Migut.F01382.2
PAC:28932017
High No 892
Coding potential...
Type: noncoding Potential: -1.043
Folding energies...
MFEI: -21.973 AMFE: -0.628
GC content
%: 34.978


Gene models
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Transcripts can be colored as magenta (coding transcripts), green (high confidence lncRNAs), cyan (low confidence lncRNAs), or salmon (other ncRNAs).

Migut.F01382.png