Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
MpusillaCCMP1545_MicpuC2.PierreAnnot2.00083 MpusillaCCMP1545_MicpuC2.PierreAnnot2.00083 |
scaffold_1 | 423535 | 423741 | Phytozome | v3.0 | Micromonas_pusilla_CCMP1545 | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
MpusillaCCMP1545_70673 MpusillaCCMP1545_70673 PAC:27345247 |
Low | No | 207 | Get ORF Coding potential... Type: noncoding Potential: -0.836 Folding energies... MFEI: -36.763 AMFE: -0.585 GC content %: 62.802 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
MpusillaCCMP1545_70673 | SwissProt | 2015-06-01 | O42921 | 1.0e-8 |