Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
MpusillaCCMP1545_MicpuC2.est_orfs.2_3160_4273655:2 MpusillaCCMP1545_MicpuC2.est_orfs.2_3160_4273655:2 |
scaffold_2 | 1663734 | 1665411 | Phytozome | v3.0 | Micromonas_pusilla_CCMP1545 | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
MpusillaCCMP1545_64177 MpusillaCCMP1545_64177 PAC:27342661 |
Low | No | 1678 | Get ORF Coding potential... Type: noncoding Potential: -0.100 Folding energies... MFEI: -28.313 AMFE: -0.580 GC content %: 48.808 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
MpusillaCCMP1545_64177 | SwissProt | 2015-06-01 | Q22516 | 2.0e-4 |