Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
MpusillaCCMP1545_gm1.6414_g MpusillaCCMP1545_gm1.6414_g |
scaffold_10 | 861224 | 861751 | Phytozome | v3.0 | Micromonas_pusilla_CCMP1545 | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
MpusillaCCMP1545_189333 MpusillaCCMP1545_189333 PAC:27340433 |
Low | Yes | 528 | Get ORF Coding potential... Type: noncoding Potential: -1.280 Folding energies... MFEI: -46.098 AMFE: -0.682 GC content %: 67.614 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
MpusillaCCMP1545_189333 | SwissProt | 2015-06-01 | O19998 | 6.0e-8 |