Gene
MpusillaRCC299 EuGene.0400010516
From GreeNC
Gene information
This table contains information about coordinates, assembly and annotation regarding the lncRNA-transcribing gene. In details, it shows whether this this gene transcribes any protein-coding transcript.
| Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
|---|---|---|---|---|---|---|---|
| MpusillaRCC299_EuGene.0400010516 MpusillaRCC299_EuGene.0400010516 |
Chr_04 | 1046245 | 1046553 | Phytozome | v3.0 | Micromonas_pusilla_RCC299 | Coding? No |
Transcript features
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
| Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
|---|---|---|---|---|---|
| MpusillaRCC299_57987 MpusillaRCC299_57987 PAC:27400566 |
High | No | 309 | Get ORF Coding potential... Type: noncoding Potential: -0.991 Folding energies... MFEI: -31.068 AMFE: -0.565 GC content %: 55.016 |
Gene models
Transcripts can be colored as magenta (coding transcripts), green (high confidence lncRNAs), cyan (low confidence lncRNAs), or salmon (other ncRNAs).
