Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Mtruncatula_Medtr0009s0270 Medtr0009s0270 |
scaffold0009 | 150999 | 151558 | Phytozome | Mt4.0v1 | Medicago_truncatula | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Mtruncatula_Medtr0009s0270.1 Medtr0009s0270.1 PAC:31106148 |
Low | No | 357 | Get ORF Coding potential... Type: noncoding Potential: -0.949 Folding energies... MFEI: -29.636 AMFE: -0.665 GC content %: 44.538 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Mtruncatula_Medtr0009s0270.1 | RepBase (RepeatMasker) | 2014-01-31 | MEGY-LTR_MT |