Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Mtruncatula_Medtr0027s0030 Medtr0027s0030 |
scaffold0027 | 10327 | 12302 | Phytozome | Mt4.0v1 | Medicago_truncatula | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Mtruncatula_Medtr0027s0030.1 Medtr0027s0030.1 PAC:31101139 |
Low | No | 300 | Get ORF Coding potential... Type: noncoding Potential: -0.357 Folding energies... MFEI: -25.467 AMFE: -0.653 GC content %: 39.000 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Mtruncatula_Medtr0027s0030.1 | SwissProt | 2015-06-01 | P10978 | 4.0e-6 |