Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Mtruncatula_Medtr1g018020 Medtr1g018020 |
chr1 | 5156633 | 5158557 | Phytozome | Mt4.0v1 | Medicago_truncatula | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Mtruncatula_Medtr1g018020.1 Medtr1g018020.1 PAC:31099538 |
High | No | 757 | Get ORF Coding potential... Type: noncoding Potential: -0.533 Folding energies... MFEI: -24.174 AMFE: -0.627 GC content %: 38.573 | |
Mtruncatula_Medtr1g018020.2 Medtr1g018020.2 PAC:31099537 |
High | No | 651 | Get ORF Coding potential... Type: noncoding Potential: -0.494 Folding energies... MFEI: -22.903 AMFE: -0.585 GC content %: 39.171 |