Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Mtruncatula_Medtr1g057800 Medtr1g057800 |
chr1 | 25426592 | 25427086 | Phytozome | Mt4.0v1 | Medicago_truncatula | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Mtruncatula_Medtr1g057800.1 Medtr1g057800.1 PAC:31096324 |
Low | No | 336 | Get ORF Coding potential... Type: coding Potential: 0.078 Folding energies... MFEI: -19.464 AMFE: -0.574 GC content %: 33.929 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Mtruncatula_Medtr1g057800.1 | RepBase (RepeatMasker) | 2014-01-31 | Copia4_I_MT-int |