Gene

Mtruncatula Medtr2g104475

From GreeNC


Gene information
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This table contains information about coordinates, assembly and annotation regarding the lncRNA-transcribing gene. In details, it shows whether this this gene transcribes any protein-coding transcript.

Gene alias / name Chrom. Start End Source Assembly Species Details

Mtruncatula_Medtr2g104475
Medtr2g104475
chr2 45007519 45009546 Phytozome Mt4.0v1 Medicago_truncatula
Coding?
No


Transcript features
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This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.

Transcript alias / name Confidence Pre-miRNA Length Sequence Details

Mtruncatula_Medtr2g104475.1
Medtr2g104475.1
PAC:31068921
High No 835
Coding potential...
Type: noncoding Potential: -0.825
Folding energies...
MFEI: -23.186 AMFE: -0.736
GC content
%: 31.497


Gene models
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Transcripts can be colored as magenta (coding transcripts), green (high confidence lncRNAs), cyan (low confidence lncRNAs), or salmon (other ncRNAs).

Medtr2g104475.png