Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Mtruncatula_Medtr4g078090 Medtr4g078090 |
chr4 | 29966965 | 29967346 | Phytozome | Mt4.0v1 | Medicago_truncatula | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Mtruncatula_Medtr4g078090.1 Medtr4g078090.1 PAC:31106311 |
Low | No | 264 | Get ORF Coding potential... Type: noncoding Potential: -0.476 Folding energies... MFEI: -16.856 AMFE: -0.530 GC content %: 31.818 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Mtruncatula_Medtr4g078090.1 | SwissProt | 2015-06-01 | Q8VWZ7 | 3.0e-8 |