Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Mtruncatula_Medtr7g057740 Medtr7g057740 |
chr7 | 20885723 | 20889109 | Phytozome | Mt4.0v1 | Medicago_truncatula | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Mtruncatula_Medtr7g057740.1 Medtr7g057740.1 PAC:31078670 |
High | No | 231 | Get ORF Coding potential... Type: noncoding Potential: -0.624 Folding energies... MFEI: -22.900 AMFE: -0.563 GC content %: 40.693 | |
Mtruncatula_Medtr7g057740.2 Medtr7g057740.2 PAC:31078668 |
High | No | 741 | Get ORF Coding potential... Type: noncoding Potential: -0.809 Folding energies... MFEI: -23.131 AMFE: -0.630 GC content %: 36.707 | |
Mtruncatula_Medtr7g057740.3 Medtr7g057740.3 PAC:31078669 |
High | No | 806 | Get ORF Coding potential... Type: noncoding Potential: -0.917 Folding energies... MFEI: -22.419 AMFE: -0.634 GC content %: 35.360 |