Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Mtruncatula_Medtr7g100335 Medtr7g100335 |
chr7 | 40266201 | 40267763 | Phytozome | Mt4.0v1 | Medicago_truncatula | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Mtruncatula_Medtr7g100335.1 Medtr7g100335.1 PAC:31077923 |
High | No | 980 | Get ORF Coding potential... Type: noncoding Potential: -0.391 Folding energies... MFEI: -22.184 AMFE: -0.657 GC content %: 33.776 | |
Mtruncatula_Medtr7g100335.2 Medtr7g100335.2 PAC:31077924 |
High | No | 1086 | Get ORF Coding potential... Type: noncoding Potential: -0.421 Folding energies... MFEI: -21.805 AMFE: -0.658 GC content %: 33.149 | |
Mtruncatula_Medtr7g100335.3 Medtr7g100335.3 PAC:31077925 |
High | No | 763 | Get ORF Coding potential... Type: noncoding Potential: -0.987 Folding energies... MFEI: -20.249 AMFE: -0.638 GC content %: 31.717 |