Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Osativa_LOC_Os06g05120 LOC_Os06g05120 |
Chr6 | 2261651 | 2263976 | Phytozome | v7.0 | Oryza_sativa_Japonica_Group | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Osativa_LOC_Os06g05120.1 LOC_Os06g05120.1 PAC:24142555 |
High | No | 501 | Get ORF Coding potential... Type: noncoding Potential: -0.913 Folding energies... MFEI: -27.465 AMFE: -0.598 GC content %: 45.908 | |
Osativa_LOC_Os06g05120.2 LOC_Os06g05120.2 PAC:24142556 |
High | No | 543 | Get ORF Coding potential... Type: noncoding Potential: -0.980 Folding energies... MFEI: -28.729 AMFE: -0.642 GC content %: 44.751 |