Gene

Osativa LOC Os06g11308

From GreeNC


Gene information
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This table contains information about coordinates, assembly and annotation regarding the lncRNA-transcribing gene. In details, it shows whether this this gene transcribes any protein-coding transcript.

Gene alias / name Chrom. Start End Source Assembly Species Details

Osativa_LOC_Os06g11308
LOC_Os06g11308
Chr6 5927194 5928879 Phytozome v7.0 Oryza_sativa_Japonica_Group
Coding?
No


Transcript features
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This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.

Transcript alias / name Confidence Pre-miRNA Length Sequence Details

Osativa_LOC_Os06g11308.1
LOC_Os06g11308.1
PAC:24139399
High No 213
Coding potential...
Type: noncoding Potential: -0.906
Folding energies...
MFEI: -29.624 AMFE: -0.558
GC content
%: 53.052


Gene models
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Transcripts can be colored as magenta (coding transcripts), green (high confidence lncRNAs), cyan (low confidence lncRNAs), or salmon (other ncRNAs).

LOC_Os06g11308.png